plotANTsImage¶

purpose:

Plotting an image slice or multi-slice with optional color overlay.

description:

This is a plotting utility for antsImage types with a background and color overlay option. Useful for displaying statistical results overlaid on a background image.

usage:

plotANTsImage( myantsimage , functional=NA, color=”red”, axis=1, slices=”1x1x1” , threshold=”1x0”, quality=NA )

examples:

# in 2D

plotANTsImage(myantsimage = img, functional = funcimg, threshold = "50x150",
    color = "red", axis = 1)

# in 3D

plotANTsImage(myantsimage = img, functional = img, threshold = "50x150", slices = "10x20x3",
    color = "red", axis = 0)